The project of the downstream tasks based on LucaVirus.

LucaVirus: Modeling the Evolutionary and Functional Landscape of Viruses with a Unified Genome-Protein Language Model

LucaProt: A novel deep learning framework that incorporates protein amino acid sequence and structural information to predict protein function.

We developed a dual-channel model named LucaPCycle, based on the raw sequence and protein language large models, to predict whether a protein sequence has phosphate-solubilizing functionality and i…

The project of the downstream tasks based on LucaOne's Embedding.

LucaOne’s representational inference code. Use this project for embedding inference.

KDD '20: Proceedings of the 26th ACM SIGKDD International Conference on Knowledge Discovery & Data Mining: Attention and Memory-Augmented Networks for Dual-View Sequential Learning

The resources of LucaOne, including: the model code, training scripts, embedding inference code, and trained checkpoints.

《动手学大模型Dive into LLMs》系列编程实践教程

A domain parser for Alphafold models

Official repository for the Boltz biomolecular interaction models

PlantCAD: cross-species modeling of plant genomes

SLiM is a genetically explicit forward simulation software package for population genetics and evolutionary biology. It is highly flexible, with a built-in scripting language, and has a cross-platf…

Making Protein Language Modeling Accessible to All Biologists

Saprot: Protein Language Model with Structural Alphabet (AA+3Di)

A fast multiple sequence alignment program.

This API provides programmatic access to the AlphaGenome model developed by Google DeepMind.

Chai-1, SOTA model for biomolecular structure prediction

Let your Claude able to think

个人网页

An open-source LLM based research assistant that allows you to have a conversation with a research paper

Dataset used in "PlantDoc: A Dataset for Visual Plant Disease Detection" accepted in CODS-COMAD 2020

Automatic detection of plant diseases

A fast multi-threaded k-mer counter