This release contains the latest safv3 along with first version of th…

…e multi population fst

0.900 is the new safv3

First master with nodepool

Removed msg used for debugging

First full htslib version

input is now based on htslib

new version

Christmas holiday version

Added an extremely unneeded option to print out data for chrs with no…

… data. Nobody ever will use this option. The fasta dumping is now using bgzf instead of std zlib. So the generated fastas can now be used directly as input for samtools faidx, this is quite handy

It counts how many high probability genotypes there are in the three …

…genotype categories (WT/HE/HO) and removes sites where at least two of the categories do not have high probability genotypes - thus allowing for the scenario where there at WE and HO genotypes. (albrecht)